BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037A01SP1|AL430319
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1697 0.0
>3x_Contig1804
Length = 51183
Score = 1697 bits (855), Expect = 0.0
Identities = 870/873 (99%), Gaps = 2/873 (0%)
Strand = Plus / Plus
Query: 1 gatctttgaatgtttcataaatttgatattttttgattgtcttctgttcaattgatgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44348 gatctttgaatgtttcataaatttgatattttttgattgtcttctgttcaattgatgatt 44407
Query: 61 ccgttgaccgttgcacttgctttataagatagactttttcttttgttgacagaaactttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44408 ccgttgaccgttgcacttgctttataagatagactttttcttttgttgacagaaactttg 44467
Query: 121 cgttas-agggttatcagggtagaggagtaagacaattatggcaagtatcaacgataaac 179
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44468 cgttagcagggttatcagggtagaggagtaagacaattatggcaagtatcaacgataaac 44527
Query: 180 cagcattgattgccataaatattctccaaggataagtggatgtattcgtatgcatcaatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44528 cagcattgattgccataaatattctccaaggataagtggatgtattcgtatgcatcaatc 44587
Query: 240 caaaagaaatgaacgatgaaagtaaaggtgctgctgctgtagctgcccaaaacactggtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44588 caaaagaaatgaacgatgaaagtaaaggtgctgctgctgtagctgcccaaaacactggtt 44647
Query: 300 gaacaatttcacgttgctccgtagtaaggaacataccaagggtaatctcacaagcaggaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44648 gaacaatttcacgttgctccgtagtaaggaacataccaagggtaatctcacaagcaggaa 44707
Query: 360 ccaccacggcttcggtggcacctaaaaaaaaacgacaagccattaaactaccataattat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44708 ccaccacggcttcggtggcacctaaaaaaaaacgacaagccattaaactaccataattat 44767
Query: 420 tacagattcctgtcaaccctacaattattgcccaggagaaaatacttccagcgagatatt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44768 tacagattcctgtcaaccctacaattattgcccaggagaaaatacttccagcgagatatt 44827
Query: 480 ttcccaagggcaatttttgcattaatatatgacatggccattgagcaataaggtacccag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44828 ttcccaagggcaatttttgcattaatatatgacatggccattgagcaataaggtacccag 44887
Query: 540 cgtagaatatagaatttaagttgttaaagtcgcctttactgattcctgtgtctgtataga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44888 cgtagaatatagaatttaagttgttaaagtcgcctttactgattcctgtgtctgtataga 44947
Query: 600 ttccaagaatggtagtataaccgattgttgatttatccatgaaaaggattaacgtaacaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44948 ttccaagaatggtagtataaccgattgttgatttatccatgaaaaggattaacgtaacaa 45007
Query: 660 gaatggttaatagagatacagcagcgaagtttttcttaacaaactttttctcttcctcct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45008 gaatggttaatagagatacagcagcgaagtttttcttaacaaactttttctcttcctcct 45067
Query: 720 cagtaagtggttccacggtagattcgtatttgtccataaatttaagaagttcgtcagcat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45068 cagtaagtggttccacggtagattcgtatttgtccataaatttaagaagttcgtcagcat 45127
Query: 780 ctttgacatcaatttttttttcctttttatcaattgaatctgagctagtctcaaattcgg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45128 ctttgacatcaatttttttttcctttttatcaattgaatctgagctagtctcaaattcgg 45187
Query: 840 tgtatttcccgtttttgcaatttatcatcttta 872
||||||||||| |||||||||||||||||||||
Sbjct: 45188 tgtatttcccg-ttttgcaatttatcatcttta 45219
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9068
Number of Sequences: 1807
Number of extensions: 9068
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)